Input/Output
This is a list of input/output code to load or save raw data.
Read_JMRUIHTML
Python module for processing the HTML files created by AMARES in jMRUI when saving the fit results for a series of spectra with the ‘publish all’ command.
| Read_JMRUIHTML | |
|---|---|
| Developer | Ronald Ouwerkerk, NIDDK/NIH, Bethesda MD, USA |
| Language | Python |
| License | BSD-3-Clause |
| Credit | If you would be so kind to acknowledge me as the source of this software when you use it for a publication it will be much appreciated. |
pymapVBVD
A python port of the Matlab mapVBVD tool for reading Siemens Twix files.
| pymapVBVD | |
|---|---|
| Developer | William Clarke |
| Language | Python |
| License | MIT |
| Credit | No credit is required for the use of this code. |
pysoher
A collection of algorithms and general code tools (GUI, I/O etc.) for use with MRS research.
| pysoher | |
|---|---|
| Developer | Brian J. Soher |
| Language | Python |
| License | BSD |
| Credit | BSD license, byproducts of the Vespa Versatile Simulation Pulses and Analysis project for MRS research at https://scion.duhs.duke.edu/vespa/project |
spec2nii
A command-line tool for converting MRS and MRSI data from a variety of formats to NIfTI + JSON format.
| spec2nii | |
|---|---|
| Developer | William Clarke |
| Language | Python |
| License | BSD-3-Clause |
| Credit | Please acknowledge the use of the tool and any creators of the tool. |